Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
UVM | rs6058316 | chr20:30255973 | G/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058381 | chr20:30275906 | A/G | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058391 | chr20:30279908 | C/T | 3.58E-13 | 67 | 27.9 | 19.35 | 3.92 | KM Plot |
UVM | rs6058443 | chr20:30313368 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058456 | chr20:30354624 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058461 | chr20:30364244 | A/G | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058464 | chr20:30392741 | G/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058469 | chr20:30409452 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058471 | chr20:30420184 | A/G | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6058473 | chr20:30427414 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060454 | chr20:30232904 | T/G | 6.36E-5 | 67 | 27.92 | 8.25 | 7.6 | KM Plot |
UVM | rs6060477 | chr20:30236745 | A/G | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060489 | chr20:30237905 | C/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060531 | chr20:30243358 | G/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060594 | chr20:30256776 | C/A | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |